HP Distance Via Double Cut and Join Distance
نویسندگان
چکیده
The genomic distance problem in the Hannenhalli-Pevzner theory is the following: Given two genomes whose chromosomes are linear, calculate the minimum number of inversions and translocations that transform one genome into the other. This paper presents a new distance formula based on a simple tree structure that captures all the delicate features of this problem in a unifying way.
منابع مشابه
A New Linear Time Algorithm to Compute the Genomic Distance Via the Double Cut and Join Distance
The genomic distance problem in the Hannenhalli-Pevzner (HP) theory is the following: Given two genomes whose chromosomes are linear, calculate the minimum number of translocations, fusions, fissions and inversions that transform one genome into the other. This paper presents a new distance formula based on a simple tree structure that captures all the delicate features of this problem in a uni...
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